2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3243 73332 C T 59 488.77 exon Transition 0/1 Mediator of RNA polymerase II transcription subunit 13 (Protein GRAND CENTR... more
Mediator of RNA polymerase II transcription subunit 13 (Protein GRAND CENTRAL) (Protein MACCHI-BOU 2)
Scaffold_3243 73468 C T 63 35.77 exon Transition 0/1 Mediator of RNA polymerase II transcription subunit 13 (Protein GRAND CENTR... more
Mediator of RNA polymerase II transcription subunit 13 (Protein GRAND CENTRAL) (Protein MACCHI-BOU 2)
Scaffold_3244 18348 A G 23 529.77 noncoding Transition 0/1 Unannotated
Scaffold_3244 18492 C T 19 47.77 noncoding Transition 0/1 Unannotated
Scaffold_3257 30693 G A 20 206.77 CDS Transition 0/1 Unannotated
Scaffold_3257 30698 C T 20 249.77 CDS Transition 0/1 Unannotated
Scaffold_3259 15853 T C 31 654.77 CDS Transition 0/1 7-deoxyloganetin glucosyltransferase (EC 2.4.1.324) (Genipin glucosyltransf... more
7-deoxyloganetin glucosyltransferase (EC 2.4.1.324) (Genipin glucosyltransferase) (UDP-glucose glucosyltransferase 2) (GjUGT2) (UDP-glycosyltransferase 85A24)
Scaffold_3259 15854 A G 28 592.77 CDS Transition 0/1 7-deoxyloganetin glucosyltransferase (EC 2.4.1.324) (Genipin glucosyltransf... more
7-deoxyloganetin glucosyltransferase (EC 2.4.1.324) (Genipin glucosyltransferase) (UDP-glucose glucosyltransferase 2) (GjUGT2) (UDP-glycosyltransferase 85A24)
Scaffold_3259 15877 G A 22 431.77 CDS Transition 0/1 7-deoxyloganetin glucosyltransferase (EC 2.4.1.324) (Genipin glucosyltransf... more
7-deoxyloganetin glucosyltransferase (EC 2.4.1.324) (Genipin glucosyltransferase) (UDP-glucose glucosyltransferase 2) (GjUGT2) (UDP-glycosyltransferase 85A24)
Scaffold_3260 13458 C T 14 262.9 noncoding Transition 0/1 NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic (EC 1.6.5.-) (NAD... more
NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase, subunit 2 B) (NADH-plastoquinone oxidoreductase subunit 2 B)
Scaffold_3267 12786 A G 12 227.77 noncoding Transition 0/1 Unannotated
Scaffold_3268 36794 C T 27 399.77 exon Transition 0/1 Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypepti... more
Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
Scaffold_3273 3469 T C 35 58.77 exon Transition 0/1 Unannotated
Scaffold_3274 46035 T C 13 153.77 exon Transition 0/1 Unannotated
Scaffold_3274 46412 C T 10 44.77 CDS Transition 0/1 Unannotated
Scaffold_3274 46445 A G 10 196.77 CDS Transition 0/1 Unannotated
Scaffold_3274 56780 G A 231 776.77 CDS Transition 0/1 Unannotated
Scaffold_3274 56798 G A 169 2341.77 CDS Transition 0/1 Unannotated
Scaffold_3274 56809 T C 142 2822.77 CDS Transition 0/1 Unannotated
Scaffold_3274 56944 A G 126 1044.77 CDS Transition 0/1 Unannotated

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