2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3640 12478 T C 39 31.77 CDS Transition 0/1 Cell division protein FtsZ homolog 1, chloroplastic (AtFtsZ1) (AtFtsZ1-1) (... more
Cell division protein FtsZ homolog 1, chloroplastic (AtFtsZ1) (AtFtsZ1-1) (Chloroplast FtsZ) (CpFtsZ) (Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 10) (Protein PLASTID MOVEMENT IMPAIRED4)
Scaffold_3641 1877 A G 15 246.77 noncoding Transition 0/1 Putative methylesterase 14, chloroplastic (AtMES14) (EC 3.1.1.-)
Scaffold_3641 1915 T C 36 794.77 noncoding Transition 0/1 Putative methylesterase 14, chloroplastic (AtMES14) (EC 3.1.1.-)
Scaffold_3641 2530 C T 12 276.22 noncoding Transition 0/1 Unannotated
Scaffold_3641 2539 T C 14 36.77 noncoding Transition 0/1 Unannotated
Scaffold_3641 2576 C T 51 822.77 noncoding Transition 0/1 Unannotated
Scaffold_3651 3008 G A 35 591.77 noncoding Transition 0/1 Unannotated
Scaffold_3651 3086 T C 39 372.77 noncoding Transition 0/1 Unannotated
Scaffold_3651 3486 C T 82 126.77 noncoding Transition 0/1 Unannotated
Scaffold_3651 3581 A G 59 544.77 noncoding Transition 0/1 Unannotated
Scaffold_3663 4598 A G 24 40.77 noncoding Transition 0/1 Unannotated
Scaffold_3663 21829 A G 250 3050.77 CDS Transition 0/1 Probable cellulose synthase A catalytic subunit 1 [UDP-forming] (EC 2.4.1.1... more
Probable cellulose synthase A catalytic subunit 1 [UDP-forming] (EC 2.4.1.12) (OsCesA1)
Scaffold_3663 21891 T C 81 1137.77 CDS Transition 0/1 Probable cellulose synthase A catalytic subunit 1 [UDP-forming] (EC 2.4.1.1... more
Probable cellulose synthase A catalytic subunit 1 [UDP-forming] (EC 2.4.1.12) (OsCesA1)
Scaffold_3663 22800 A G 50 178.77 CDS Transition 0/1 Novel plant SNARE 12 (AtNPSN12)
Scaffold_3663 22802 A G 48 178.77 CDS Transition 0/1 Novel plant SNARE 12 (AtNPSN12)
Scaffold_3664 13777 G A 15 181.77 CDS Transition 0/1 Unannotated
Scaffold_3673 6553 C T 97 1387.77 CDS Transition 0/1 Unannotated
Scaffold_3673 6567 T C 86 893.77 CDS Transition 0/1 Unannotated
Scaffold_3673 6665 G A 142 899.77 CDS Transition 0/1 Unannotated
Scaffold_3673 6765 T C 13 108.77 intron Transition 0/1 Unannotated

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