2. INDEls on Clusterbean
  3. Rgc-936 Snps

Rgc-936 Snps

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Total record count: 9714.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3798 6411 T C 17 442.79 intron Transition 0/1 12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-re... more
12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3)
Scaffold_3798 6412 A G 13 294.77 intron Transition 0/1 12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-re... more
12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3)
Scaffold_3798 29415 T C 13 147.77 CDS Transition 0/1 Probable sodium/metabolite cotransporter BASS4, chloroplastic (Bile acid tr... more
Probable sodium/metabolite cotransporter BASS4, chloroplastic (Bile acid transporter 4) (Bile acid-sodium symporter family protein 4)
Scaffold_3798 40760 A G 41 547.77 noncoding Transition 0/1 Unannotated
Scaffold_3798 42198 T C 19 241.77 noncoding Transition 0/1 Unannotated
Scaffold_3808 28388 A G 14 271.77 exon Transition 0/1 Unannotated
Scaffold_3810 54998 T C 12 63.77 intron Transition 0/1 Uncharacterized protein At2g37660, chloroplastic
Scaffold_3811 57062 T C 96 862.77 exon Transition 0/1 Unannotated
Scaffold_3811 57137 G A 111 354.77 exon Transition 0/1 Unannotated
Scaffold_3811 57152 T C 106 526.77 exon Transition 0/1 Unannotated
Scaffold_3811 57233 G A 135 320.77 exon Transition 0/1 Unannotated
Scaffold_3811 58035 A G 57 40.77 intron Transition 0/1 Unannotated
Scaffold_3811 58044 G A 55 45.77 intron Transition 0/1 Unannotated
Scaffold_3811 58084 G A 33 748.77 intron Transition 0/1 Unannotated
Scaffold_3811 58158 A G 10 279.22 intron Transition 0/1 Unannotated
Scaffold_3811 58344 T C 28 154.77 CDS Transition 0/1 Unannotated
Scaffold_3811 58365 G A 12 232.77 CDS Transition 0/1 Unannotated
Scaffold_3811 58366 C T 12 229.77 CDS Transition 0/1 Unannotated
Scaffold_3811 59158 T C 60 932.77 exon Transition 0/1 Unannotated
Scaffold_3822 1323 C T 179 4067.77 noncoding Transition 0/1 Unannotated

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