Rgc-936 Snps

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Total record count: 9714.

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	SNP Id	Position	Reference Allele	Alternate Allele	DP	Quality	Located At	Type	Genotype	Function
	Scaffold_3822	1439	A	G	15	183.77	noncoding	Transition	0/1	Unannotated
	Scaffold_3832	31530	C	T	16	152.77	CDS	Transition	0/1	Unannotated
	Scaffold_3832	31552	A	G	12	139.77	CDS	Transition	0/1	Unannotated
	Scaffold_3836	26016	C	T	19	386.77	exon	Transition	0/1	Unannotated
	Scaffold_3842	4017	C	T	10	270.53	noncoding	Transition	0/1	Putative AC9 transposase
	Scaffold_3846	50479	T	C	250	1214.77	CDS	Transition	0/1	Thioredoxin M-type, chloroplastic (Trx-M)
	Scaffold_3854	40090	G	A	11	243.03	intron	Transition	0/1	Unannotated
	Scaffold_3854	40176	G	A	10	65.77	intron	Transition	0/1	Unannotated
	Scaffold_3855	72193	G	A	11	233.18	noncoding	Transition	0/1	Unannotated
	Scaffold_3858	20729	T	C	244	2073.77	intron	Transition	0/1	Unannotated
	Scaffold_3860	16930	G	A	250	30.77	exon	Transition	0/1	ATP-dependent zinc metalloprotease FTSH 2, chloroplastic (AtFTSH2) (EC 3.4.... more ATP-dependent zinc metalloprotease FTSH 2, chloroplastic (AtFTSH2) (EC 3.4.24.-) (Protein VARIEGATED 2)
	Scaffold_3862	7584	A	G	12	73.77	exon	Transition	0/1	SUMO-conjugating enzyme UBC9 (EC 2.3.2.-) (RING-type E3 SUMO transferase UB... more SUMO-conjugating enzyme UBC9 (EC 2.3.2.-) (RING-type E3 SUMO transferase UBC9) (UBCAT4B) (Ubiquitin carrier protein 9) (Ubiquitin-conjugating enzyme E2 9) (Ubiquitin-conjugating enzyme E2-17 kDa) (Ubiquitin-protein ligase 9)
	Scaffold_3862	35206	T	C	30	96.77	CDS	Transition	0/1	Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (e... more Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110) (p82)
	Scaffold_3862	35351	T	C	138	2610.77	CDS	Transition	0/1	Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (e... more Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110) (p82)
	Scaffold_3862	35441	G	A	201	587.77	CDS	Transition	0/1	Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (e... more Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110) (p82)
	Scaffold_3862	35456	T	C	177	563.77	CDS	Transition	0/1	Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (e... more Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110) (p82)
	Scaffold_3862	35750	T	C	44	139.77	CDS	Transition	0/1	Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (e... more Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110) (p82)
	Scaffold_3862	35968	C	T	83	71.77	CDS	Transition	0/1	Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (e... more Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110) (p82)
	Scaffold_3862	35989	G	A	170	758.77	CDS	Transition	0/1	Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (e... more Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110) (p82)
	Scaffold_3862	36025	G	A	250	1126.77	CDS	Transition	0/1	Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (e... more Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110) (p82)
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