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M-83 SNPs

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Total record count: 7933.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_180 156040 G A 10 81.77 noncoding Transition 0/1 Unannotated
Scaffold_180 156052 T C 10 78.77 noncoding Transition 0/1 Unannotated
Scaffold_180 156373 T C 15 30.77 noncoding Transition 0/1 Unannotated
Scaffold_180 294223 T C 27 59.77 exon Transition 0/1 Unannotated
Scaffold_180 498844 T C 20 49.77 exon Transition 0/1 Unannotated
Scaffold_181 419109 T C 22 365.77 CDS Transition 0/1 Unannotated
Scaffold_181 425670 G A 20 540.78 CDS Transition 0/1 Calcium-dependent protein kinase 1 (OsCDPK1) (OsCPK1) (EC 2.7.11.1)
Scaffold_181 471955 T C 16 37.77 exon Transition 0/1 Probable UDP-arabinopyranose mutase 4 (EC 5.4.99.30) (Reversibly glycosylat... more
Probable UDP-arabinopyranose mutase 4 (EC 5.4.99.30) (Reversibly glycosylated polypeptide 4) (AtRGP4) (UDP-L-arabinose mutase 4)
Scaffold_181 482871 C T 12 187.77 exon Transition 0/1 Unannotated
Scaffold_181 483055 T C 19 34.77 exon Transition 0/1 Unannotated
Scaffold_181 539012 T C 14 344.56 CDS Transition 0/1 Unannotated
Scaffold_181 539020 T C 14 347.22 CDS Transition 0/1 Unannotated
Scaffold_181 589433 T C 13 33.77 exon Transition 0/1 Unannotated
Scaffold_181 619466 T C 15 49.77 exon Transition 0/1 Unannotated
Scaffold_181 643962 T C 14 83.77 exon Transition 0/1 Unannotated
Scaffold_181 676797 G A 20 68.77 CDS Transition 0/1 Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein... more
Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
Scaffold_181 678121 G A 43 72.77 CDS Transition 0/1 Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein... more
Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
Scaffold_181 685889 T C 10 58.77 CDS Transition 0/1 Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein... more
Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
Scaffold_181 692185 G A 24 31.77 CDS Transition 0/1 Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein... more
Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
Scaffold_181 853375 A G 14 33.77 CDS Transition 0/1 DNA-directed RNA polymerase II subunit 2 (DNA-directed RNA polymerase II 13... more
DNA-directed RNA polymerase II subunit 2 (DNA-directed RNA polymerase II 135 kDa polypeptide) (DNA-directed RNA polymerase II subunit RPB2) (RNA polymerase II subunit 2) (RNA polymerase II subunit B2) (EC 2.7.7.6) (Protein EMBRYO DEFECTIVE 1989)

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