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  3. M-83 SNPs

M-83 SNPs

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Total record count: 7933.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3480 40559 G A 250 2331.77 exon Transition 0/1 Unannotated
Scaffold_3480 40766 C T 129 2033.77 exon Transition 0/1 Unannotated
Scaffold_3481 28595 G A 21 92.77 noncoding Transition 0/1 Unannotated
Scaffold_3481 28658 G A 23 218.77 noncoding Transition 0/1 Unannotated
Scaffold_3481 28684 C T 66 1056.77 noncoding Transition 0/1 Unannotated
Scaffold_3487 17383 A G 11 95.77 noncoding Transition 0/1 Unannotated
Scaffold_3488 46292 T C 21 34.77 noncoding Transition 0/1 Unannotated
Scaffold_3489 4962 G A 22 34.77 exon Transition 0/1 Serine carboxypeptidase-like 50 (EC 3.4.16.-)
Scaffold_3492 5068 A G 69 141.77 noncoding Transition 0/1 Unannotated
Scaffold_3492 5072 A G 143 138.77 noncoding Transition 0/1 Unannotated
Scaffold_3492 6262 A G 250 157.77 noncoding Transition 0/1 Unannotated
Scaffold_3498 21077 T C 250 138.77 noncoding Transition 0/1 Unannotated
Scaffold_3498 22249 T C 65 166.77 noncoding Transition 0/1 Unannotated
Scaffold_3503 27905 C T 250 1473.77 noncoding Transition 0/1 Unannotated
Scaffold_3503 27906 A G 250 3592.77 noncoding Transition 0/1 Unannotated
Scaffold_3504 2071 A G 84 106.77 noncoding Transition 0/1 Unannotated
Scaffold_3504 22728 T C 16 71.77 exon Transition 0/1 Unannotated
Scaffold_3505 37774 G A 13 66.77 exon Transition 0/1 Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (A... more
Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3505 37846 T C 12 64.77 exon Transition 0/1 Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (A... more
Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3506 14179 G A 30 40.77 CDS Transition 0/1 Unannotated

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