RGC-1066 SNPs

	SNP Id	Position	Reference Allele	Alternate Allele	DP	Quality	Located At	Type	Genotype	Function
	Scaffold_172	281943	G	T	41	1336.77	CDS	Transversion	1/1	Unannotated
	Scaffold_172	282012	G	C	97	1119.77	CDS	Transversion	0/1	Unannotated
	Scaffold_172	282044	A	C	97	937.77	CDS	Transversion	0/1	Unannotated
	Scaffold_172	282114	A	T	50	208.77	exon	Transversion	0/1	Unannotated
	Scaffold_172	284074	G	C	40	954.77	exon	Transversion	0/1	Unannotated
	Scaffold_172	542023	G	T	13	110.77	intron	Transversion	0/1	Unannotated
	Scaffold_172	542026	A	C	12	126.77	intron	Transversion	0/1	Unannotated
	Scaffold_172	543704	T	G	17	211.77	noncoding	Transversion	0/1	Unannotated
	Scaffold_172	558044	G	C	26	659.77	exon	Transversion	1/1	Increased DNA methylation 1 (Histone H3 acetyltransferase IDM1) (EC 2.3.1.-... more Increased DNA methylation 1 (Histone H3 acetyltransferase IDM1) (EC 2.3.1.-) (Protein ROS4) (Repressor of silencing 4)
	Scaffold_172	558122	A	T	10	333.78	intron	Transversion	1/1	Unannotated
	Scaffold_172	558562	G	T	19	483.77	CDS	Transversion	1/1	Increased DNA methylation 1 (Histone H3 acetyltransferase IDM1) (EC 2.3.1.-... more Increased DNA methylation 1 (Histone H3 acetyltransferase IDM1) (EC 2.3.1.-) (Protein ROS4) (Repressor of silencing 4)
	Scaffold_172	689357	T	G	20	560.77	CDS	Transversion	1/1	Unannotated
	Scaffold_173	2480	T	A	11	370.77	exon	Transversion	1/1	Probable galacturonosyltransferase 14 (EC 2.4.1.-)
	Scaffold_173	16483	C	A	14	202.77	CDS	Transversion	0/1	Unannotated
	Scaffold_173	79068	A	C	13	341.78	exon	Transversion	1/1	Unannotated
	Scaffold_173	81434	G	T	19	605.77	CDS	Transversion	1/1	Unannotated
	Scaffold_173	81565	A	C	12	375.77	CDS	Transversion	1/1	Unannotated
	Scaffold_173	156362	C	G	22	751.77	exon	Transversion	1/1	Unannotated
	Scaffold_173	271731	G	T	168	5176.77	exon	Transversion	1/1	Unannotated
	Scaffold_173	304577	A	C	28	894.77	CDS	Transversion	1/1	Unannotated
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