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  3. RGC-1066 SNPs

RGC-1066 SNPs

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Total record count: 10279.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3805 5117 G T 250 9818.77 intron Transversion 1/1 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic (EC 1.6.5.-) (NAD(P... more
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit I) (NDH subunit I) (NADH-plastoquinone oxidoreductase subunit I)
Scaffold_3805 5245 C A 92 3552.77 intron Transversion 1/1 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic (EC 1.6.5.-) (NAD(P... more
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit I) (NDH subunit I) (NADH-plastoquinone oxidoreductase subunit I)
Scaffold_3805 5248 G C 80 3130.77 intron Transversion 1/1 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic (EC 1.6.5.-) (NAD(P... more
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit I) (NDH subunit I) (NADH-plastoquinone oxidoreductase subunit I)
Scaffold_3806 44115 T G 108 3227.04 noncoding Transversion 1/1 Unannotated
Scaffold_3808 40830 A C 24 763.78 noncoding Transversion 1/1 Unannotated
Scaffold_3809 7614 T G 17 347.77 noncoding Transversion 0/1 Unannotated
Scaffold_3810 783 G C 57 367.77 CDS Transversion 0/1 Unannotated
Scaffold_3810 847 A T 21 304.77 CDS Transversion 0/1 Unannotated
Scaffold_3811 56925 T G 13 67.77 exon Transversion 0/1 Unannotated
Scaffold_3813 54226 C G 85 3013.77 noncoding Transversion 1/1 Protein TIC 214 (Translocon at the inner envelope membrane of chloroplasts ... more
Protein TIC 214 (Translocon at the inner envelope membrane of chloroplasts 214) (AtTIC214)
Scaffold_3814 73622 G T 14 417.77 noncoding Transversion 1/1 Unannotated
Scaffold_3816 7058 G T 10 304.77 noncoding Transversion 1/1 Unannotated
Scaffold_3821 45637 T A 11 173.9 noncoding Transversion 1/1 Unannotated
Scaffold_3822 1370 C G 51 42.77 noncoding Transversion 0/1 Unannotated
Scaffold_3822 3081 T G 33 41.77 noncoding Transversion 0/1 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P... more
NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 5) (NADH-plastoquinone oxidoreductase subunit 5)
Scaffold_3823 21968 C G 15 556.77 noncoding Transversion 1/1 Unannotated
Scaffold_3824 10579 A C 250 285.77 noncoding Transversion 0/1 Unannotated
Scaffold_3824 10766 A C 249 468.77 noncoding Transversion 0/1 Unannotated
Scaffold_3824 10789 A C 250 1225.77 exon Transversion 0/1 Unannotated
Scaffold_3824 10843 T G 249 43.77 exon Transversion 0/1 Unannotated

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