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RGC-1066 SNPs

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Total record count: 10279.

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SNP Id Position Reference Allele Alternate Allele DP Quality Located At Type Genotype Function
Scaffold_3034 21390 A C 250 1420.77 noncoding Transversion 0/1 Unannotated
Scaffold_3034 21391 G T 248 872.77 noncoding Transversion 0/1 Unannotated
Scaffold_3034 21501 C G 126 4591.77 noncoding Transversion 1/1 Unannotated
Scaffold_3034 21502 T G 125 4522.77 noncoding Transversion 1/1 Unannotated
Scaffold_3034 42652 A T 11 324.78 CDS Transversion 1/1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Prot... more
Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_3035 22251 C G 11 245.77 noncoding Transversion 0/1 Unannotated
Scaffold_3037 23193 G T 13 101.77 exon Transversion 0/1 Unannotated
Scaffold_3037 23206 T A 11 340.78 exon Transversion 1/1 Unannotated
Scaffold_3039 52735 G C 11 150.77 intron Transversion 0/1 Unannotated
Scaffold_3039 52791 A C 20 178.77 intron Transversion 0/1 Unannotated
Scaffold_3039 54068 C A 33 39.77 CDS Transversion 0/1 Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17)
Scaffold_3039 54925 C A 157 164.77 intron Transversion 0/1 Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17)
Scaffold_3039 55185 T G 32 749.77 CDS Transversion 0/1 Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17)
Scaffold_3039 55509 C G 81 314.77 CDS Transversion 0/1 Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17)
Scaffold_3039 55752 T G 10 39.77 intron Transversion 0/1 Unannotated
Scaffold_3039 55971 C A 50 1665.77 CDS Transversion 1/1 Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17)
Scaffold_3040 25827 T G 149 2203.77 intron Transversion 0/1 Unannotated
Scaffold_3040 26744 T A 39 1010.77 CDS Transversion 1/1 Exportin-2 (Exp2) (Cellular apoptosis susceptibility protein homolog) (Impo... more
Exportin-2 (Exp2) (Cellular apoptosis susceptibility protein homolog) (Importin-alpha re-exporter)
Scaffold_3040 26762 C G 46 1275.77 CDS Transversion 1/1 Exportin-2 (Exp2) (Cellular apoptosis susceptibility protein homolog) (Impo... more
Exportin-2 (Exp2) (Cellular apoptosis susceptibility protein homolog) (Importin-alpha re-exporter)
Scaffold_3040 27107 T A 13 107.77 CDS Transversion 0/1 Exportin-2 (Exp2) (Cellular apoptosis susceptibility protein homolog) (Impo... more
Exportin-2 (Exp2) (Cellular apoptosis susceptibility protein homolog) (Importin-alpha re-exporter)

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